STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BD97Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (801 aa)    
Predicted Functional Partners:
A0A0N7LA54
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.992
A0A0P1B9W1
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.992
A0A0P1BBM2
Mitochondrial nad-dependent isocitrate dehydrogenase subunit 1.
  
 0.985
A0A0P1BQF0
Citrate synthase; Belongs to the citrate synthase family.
  
 0.984
A0A0P1BM01
Isocitrate lyase.
  
 0.965
A0A0P1BQN1
2-oxoglutarate dehydrogenase complex e1 component mitochondrial.
  
 
 0.949
A0A0P1BMM7
Citrate synthase; Belongs to the citrate synthase family.
  
 0.946
A0A0P1B899
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.929
A0A0N7L9C3
ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family.
  
 0.924
A0A0P1BCP1
Dihydrolipoamide succinyltransferase.
   
 
 0.905
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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