STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BDB950s ribosomal protein l13. (172 aa)    
Predicted Functional Partners:
A0A0N7L9G9
Related to 50s ribosomal protein l22; Belongs to the universal ribosomal protein uL22 family.
  
 0.999
A0A0N7L9Q2
RP-S11, MRPS11, rpsK.
  
 0.999
A0A0N7L9X3
Mitochondrial/chloroplast ribosomal protein S16.
  
 
 0.999
A0A0N7LAG3
Related to mrpl9-mitochondrial ribosomal large subunit.
  
 0.999
A0A0P1B822
50s ribosomal protein l19.
  
 
 0.999
A0A0P1B8M7
Mitochondrial ribosomal protein l11; Belongs to the universal ribosomal protein uL11 family.
  
 0.999
A0A0P1BDK9
Probable 50s ribosomal protein l33.
  
 
 0.999
A0A0P1BDZ7
Mitochondrial/chloroplast ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.999
A0A0P1BG84
Mitochondrial 54s ribosomal protein rml2.
  
 0.999
A0A0P1BGI8
Mitochondrial/chloroplast ribosomal protein S9.
  
 
 0.999
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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