STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BDG0Nucleolus protein. (558 aa)    
Predicted Functional Partners:
A0A0P1BH02
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
   0.911
A0A0P1BMU5
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.899
A0A0P1BEZ3
Nucleolar protein NOP52/RRP1.
   
 
 0.894
A0A0P1BA52
Protein required for biogenesis of the ribosomal 60S subunit.
   
   0.892
A0A0N7LAX0
40s ribosomal protein s15; Belongs to the universal ribosomal protein uS19 family.
    
   0.877
A0A0P1BEQ7
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.866
A0A0P1BGB6
Related to nop15-protein involved in 60s ribosomal subunit biogenesis.
   
   0.862
A0A0P1BQU3
Atp-dependent rna helicase has1; Belongs to the DEAD box helicase family.
   
 
 0.859
A0A0N7LBE0
Uncharacterized protein.
   
   0.832
A0A0P1B981
DNA-dependent RNA polymerase I.
   
    0.832
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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