STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BDR8Ubiquitin-like protein. (77 aa)    
Predicted Functional Partners:
A0A0N7LAP6
Elongation factor 3.
    
 
 0.992
A0A0P1BMP6
Mrna export factor elf1.
    
 
 0.992
A0A0P1BDV2
Sentrin-specific cysteine protease (Ulp1 family).
    
 0.991
A0A0P1BK60
Ring-box protein 1.
   
 0.989
A0A0P1BHC8
E2 ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.988
A0A0P1BIR4
Nedd8 activating enzyme.
    
 0.988
A0A0P1BCK5
Cop9 signalosome complex subunit 5.
   
 0.984
A0A0P1BR47
NEDD8-activating complex, APP-BP1/UBA5 component.
    
 0.982
A0A0N7L969
Uncharacterized protein.
    
 0.981
A0A0P1BQ47
COP9 signalosome, subunit CSN6.
   
 0.981
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.