STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BEF6Rab small monomeric gtpase. (250 aa)    
Predicted Functional Partners:
A0A0P1BB78
Uncharacterized conserved protein Sand.
    
 0.948
A0A0P1BKA2
RAB PROTEINS GERANYLGERANYLTRANSFERASE COMPONENT A.
    
 0.906
A0A0P1BR88
GDP dissociation inhibitor.
    
 0.906
A0A0P1B9U0
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.896
A0A0P1BH53
Dynein light intermediate chain.
   
 0.886
A0A0P1BHF3
Gtp-binding protein ypt1.
  
0.882
A0A0P1BEH2
Cytoplasmic dynein heavy chain 2.
    
 0.881
A0A0P1BDK1
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.875
A0A0P1BI13
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
  0.868
A0A0P1BKS6
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
  0.868
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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