STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BES8Rho GDP-dissociation inhibitor. (185 aa)    
Predicted Functional Partners:
A0A0P1BBZ1
Gtp binding protein cdc42.
   
 0.977
A0A0P1BI30
Ras-like c3 botulinum toxin substrate 1.
   
 0.967
A0A0P1B9H1
Signal transducer.
   
 0.940
A0A0P1BKQ3
Small gtpase-binding protein.
   
 0.940
A0A0P1BA77
Probable rho2-gtp binding protein rho2.
   
 0.927
A0A0P1BHR3
4-hydroxybenzoate polyprenyl transferase.
 
    
 0.821
A0A0P1BP60
GTPase Rab2, small G protein superfamily.
   
 0.796
A0A0N7L9S6
Ras protein.
   
 0.771
A0A0P1BK18
Ras small monomeric gtpase.
   
 0.771
A0A0P1BMK0
Small g-protein ras2.
   
 0.771
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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