STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BEX6Retrotransposon nucleocapsid protein. (245 aa)    
Predicted Functional Partners:
A0A0P1BR38
Dna rna polymerases superfamily protein.
 
     0.947
A0A0P1B9H2
annotation not available
 
     0.931
A0A0P1BSE6
annotation not available
 
     0.854
A0A0P1BA33
annotation not available
 
     0.847
A0A0P1BER6
annotation not available
 
     0.780
A0A0P1BFD0
annotation not available
 
     0.718
A0A0P1BGQ7
Uncharacterized protein.
    
  0.640
A0A0P1BDF0
Nucleosome remodeling subunit caf1 nurf55 msi1.
    
 0.626
A0A0P1BAS2
Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit.
    
 0.625
A0A0P1BCX9
Uncharacterized protein.
    
  0.585
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.