STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BGL1SAGA-associated factor 11. (331 aa)    
Predicted Functional Partners:
A0A0P1BKR4
Transcription factor e(Y)2.
    
 0.984
A0A0P1BS48
Nuclear protein Ataxin-7.
    
 0.980
A0A0P1BHA7
Transcription initiation factor tfiid subunit 12.
    
 0.971
A0A0P1BLR0
Ubiquitin carboxyl-terminal hydrolase.
    
 0.969
A0A0P1BDR6
Histone acetyltransferases PCAF/SAGA/ADA, subunit TADA3L/NGG1.
    
 0.964
A0A0P1BLT4
Histone acetyltransferase SAGA, TRRAP/TRA1 component, PI-3 kinase superfamily; Belongs to the PI3/PI4-kinase family.
    
 0.963
A0A0N7L944
Related to spt3-general transcriptional adaptor or co-activator.
    
 0.950
A0A0P1BED1
annotation not available
   
 0.948
A0A0P1BIH3
Transcription initiation factor subunit taf10.
    
 0.941
A0A0N7L9Q6
Nuclear receptor coregulator SMRT/SMRTER, contains Myb-like domains.
    
 0.940
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.