STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BGS8Uncharacterized conserved protein. (654 aa)    
Predicted Functional Partners:
A0A0P1B9P1
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
    0.783
A0A0P1BMP6
Mrna export factor elf1.
   
    0.515
A0A0N7L9I0
Cyclin-dependent protein kinase inhibitor.
    
  0.494
A0A0P1BAA2
Uncharacterized protein.
    
  0.494
A0A0P1BAP8
ADENINE/GUANINE PERMEASE AZG1.
    
  0.494
A0A0P1BL94
Uncharacterized protein.
    
  0.494
A0A0P1BLP8
Uncharacterized protein.
    
  0.494
A0A0P1BKT7
N-methyltransferase.
    
 
 0.489
A0A0P1BQ03
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  
 0.488
A0A0P1BD70
Guanidinoacetate methyltransferase and related proteins.
   
  
 0.473
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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