STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BH01Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. (537 aa)    
Predicted Functional Partners:
A0A0P1BFQ2
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.985
A0A0P1BRP9
Got1-domain-containing protein.
  
 
 0.975
A0A0P1BC84
Nitrate reductase.
  
 
 0.907
A0A0P1BCK9
Cytochrome b5; Belongs to the cytochrome b5 family.
  
 
 0.907
A0A0N7LB94
Armadillo beta-catenin plakoglobin.
    
 0.884
A0A0N7LA21
Ump-cmp kinase; Belongs to the adenylate kinase family.
   
 0.883
A0A0P1BP00
Prtase-like protein.
    
 0.881
A0A0P1BNH6
XANTHINE PERMEASE XANQ.
  
  
 0.872
A0A0P1BFF4
Orotate phosphoribosyltransferase.
   
 0.859
A0A0P1BPQ1
Armadillo beta-catenin plakoglobin.
    
 0.846
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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