STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BHI1Membrane trafficking and cell signaling protein HRS, contains VHS and FYVE domains. (280 aa)    
Predicted Functional Partners:
A0A0P1BF99
Vacuolar sorting protein/ubiquitin receptor VPS23.
    
 0.965
A0A0P1BAI4
RhoGEF GTPase.
    
 0.964
A0A0P1BCG2
Ubiquitin-40s ribosomal protein s27a.
    
  0.933
A0A0P1BNC7
Predicted signal transduction protein.
   
 0.901
A0A0P1BE24
Polyubiquitin.
    
  0.864
A0A0P1BEL5
Ubiquitin and ubiquitin-like proteins.
    
  0.864
A0A0P1BPR0
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.839
A0A0P1B8I3
Related to hse1-class e vacuolar protein-sorting machinery protein.
   
 0.825
A0A0P1BAM9
SHO1; Plasma membrane osmosensor that activates the high osmolarity glycerol (HOG) MAPK signaling pathway in response to high osmolarity.
   
 0.825
A0A0P1BBH3
Signal transducing adaptor protein STAM/STAM2.
   
 0.825
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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