STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BHQ3Pseudouridylate synthase. (760 aa)    
Predicted Functional Partners:
A0A0P1BAC7
Pseudouridine synthase.
   
 0.878
A0A0P1BDZ7
Mitochondrial/chloroplast ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
  
 0.853
A0A0P1BEZ3
Nucleolar protein NOP52/RRP1.
   
    0.780
A0A0P1BMP6
Mrna export factor elf1.
  
   0.778
A0A0P1BGA2
Uncharacterized conserved protein.
   
 
 0.777
A0A0P1BJ76
Probable rpc40-40 kd subunit of dna-directed rna polymerases i and iii.
  
  
 0.757
A0A0P1BN80
RNA polymerase II, subunit POLR2C/RPB3.
  
  
 0.757
A0A0P1BEL2
WD40 REPEAT PROTEIN 4.
   
 
 0.756
A0A0P1BPG0
Uncharacterized protein.
   
    0.735
A0A0P1B7J0
Tryptophan synthase.
     
 0.721
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.