STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BHV3Isocitrate lyase. (356 aa)    
Predicted Functional Partners:
A0A0P1BGA8
Malate synthase; Belongs to the malate synthase family.
 
 
 
 0.982
A0A0P1BCY4
Acetolactate synthase.
  
 
 0.849
A0A0N7LA52
Plp-dependent transferase.
  
 
 0.830
A0A0P1BGK5
Malate glyoxysomal.
   
 
 0.830
A0A0P1BJE2
Uncharacterized protein.
  
 0.822
A0A0P1BMM7
Citrate synthase; Belongs to the citrate synthase family.
  
 0.822
A0A0P1BQF0
Citrate synthase; Belongs to the citrate synthase family.
  
 0.822
A0A0P1BNZ8
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
 
 0.809
A0A0P1BNT6
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 0.786
A0A0P1BJA5
Succinate dehydrogenase, cytochrome b subunit.
    
 0.785
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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