STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BJD6Ribonuclease H. (361 aa)    
Predicted Functional Partners:
A0A0P1BJP6
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.952
A0A0N7L996
Thymidylate synthase.
    
 0.824
A0A0P1BQM1
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.770
A0A0P1BPC0
NADH pyrophosphatase I of the Nudix family of hydrolases.
    
  0.767
A0A0P1BLU6
Enolase.
    
  0.744
A0A0P1BDJ4
Signal peptide peptidase 67k type.
    
 0.705
A0A0P1BR14
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.705
A0A0P1BA57
Thymidylate kinase.
  
 
 0.673
A0A0N7L986
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.659
A0A0P1BGC0
NAD(P)H NITROREDUCTASE YDJA-RELATED.
    
 0.645
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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