STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BJH4Sphingolipid c9-methyltransferase. (596 aa)    
Predicted Functional Partners:
A0A0P1BA17
Uncharacterized protein.
 
    
 0.849
A0A0P1B8Y3
Elongation factor 1 beta delta chain; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.837
A0A0P1BJG5
Cysteine peroxiredoxin.
   
 0.788
A0A0P1B9E9
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.762
A0A0P1BQT3
Glutathione synthetase.
    
 0.748
A0A0P1BFH9
Glutathione-disulfide reductase.
     
 0.739
A0A0P1BPC1
Gamma-glutamyltransferase.
     
 0.732
A0A0P1BMP6
Mrna export factor elf1.
   
 
 0.704
A0A0P1BJ76
Probable rpc40-40 kd subunit of dna-directed rna polymerases i and iii.
   
 
 0.658
A0A0P1BN80
RNA polymerase II, subunit POLR2C/RPB3.
   
 
 0.658
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.