STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BJK6Related to emg1-protein required for ribosome biogenesis. (395 aa)    
Predicted Functional Partners:
A0A0N7LAK2
Predicted nucleolar protein involved in ribosome biogenesis.
   
 0.999
A0A0P1B8S3
Ribosomal rna assembly protein mis3.
  
 0.999
A0A0P1BBD8
Nucleolar protein involved in 40S ribosome biogenesis.
   
 0.999
A0A0P1B9C5
U3 small nucleolar RNA-associated protein 22.
   
 0.998
A0A0P1BJE4
Uncharacterized conserved protein.
   
 0.998
A0A0P1BAC2
Cell adhesion complex protein bystin.
   
 
 0.997
A0A0P1BH48
Nop domain-containing protein.
   
 
 0.997
A0A0P1BDX8
HAT (Half-A-TPR) repeat-containing protein.
   
 
 0.996
A0A0P1BQG0
WD40-repeat-containing subunit of the 18S rRNA processing complex.
   
 
 0.996
A0A0P1BA35
Duf663-domain-containing protein.
   
 
 0.995
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.