STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BK21Exosomal 3'-5' exoribonuclease complex, subunit Rrp41 and related exoribonucleases. (313 aa)    
Predicted Functional Partners:
A0A0N7LAE7
Exosomal 3'-5' exoribonuclease complex, subunit Rrp41 and related exoribonucleases.
   
 0.999
A0A0P1B7I2
Exosomal 3'-5' exoribonuclease complex, subunit Rrp43.
   
 0.999
A0A0P1BRB1
Exosomal 3'-5' exoribonuclease complex subunit Rrp40.
  
 0.998
A0A0N7LBI8
Exosomal 3'-5' exoribonuclease complex, subunit Rrp4.
   
 0.996
A0A0P1BHS1
Exosomal 3'-5' exoribonuclease complex, subunit ski4 (Csl4).
   
 0.996
A0A0P1BIN8
Exosomal 3'-5' exoribonuclease complex, subunit Rrp46.
   
 0.994
A0A0P1BEI8
Exosomal 3'-5' exoribonuclease complex, subunit Rrp45.
   
 0.993
A0A0P1BRJ8
Exosomal 3-5 exoribonuclease subunit rrp44 dis3.
   
 0.978
A0A0N7LA62
C1D, LRP1.
   
 0.966
A0A0P1BA18
DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.
   
 0.960
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.