STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BK7560s ribosomal protein L34. (646 aa)    
Predicted Functional Partners:
A0A0P1BDF0
Nucleosome remodeling subunit caf1 nurf55 msi1.
   
 0.752
A0A0P1BBH7
Cdc2 cyclin-dependent kinase; Belongs to the protein kinase superfamily.
   
 0.609
A0A0P1BEZ1
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.609
A0A0N7LA14
Related to 30s ribosomal protein s18.
    
   0.544
A0A0P1BKZ2
Copper chaperone taha.
    
   0.543
A0A0N7L8X4
Atp-dependent metallopeptidase hfl.
    
 
 0.524
A0A0N7LAG3
Related to mrpl9-mitochondrial ribosomal large subunit.
    
 
 0.514
A0A0P1BD53
rRNA processing protein Rrp5.
   
   0.512
A0A0P1BGJ5
40s ribosomal protein s29-a.
    
 
 0.511
A0A0P1BNZ5
Ribosomal protein l15.
    
 
 0.511
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.