STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BLP7RTR1-type domain-containing protein. (541 aa)    
Predicted Functional Partners:
A0A0P1BC84
Nitrate reductase.
    
 0.794
A0A0P1BCK9
Cytochrome b5; Belongs to the cytochrome b5 family.
    
 0.788
A0A0P1BDT4
F-BOX AND WD40 DOMAIN PROTEIN.
   
  0.671
A0A0N7L9Q2
RP-S11, MRPS11, rpsK.
    
  0.650
A0A0P1BD67
RNA polymerase III transcription factor TFIIIC.
    
 0.639
A0A0P1BDN5
Related to mrp4-mitochondrial ribosomal small subunit; Belongs to the universal ribosomal protein uS2 family.
   
  0.635
A0A0P1BGJ5
40s ribosomal protein s29-a.
    
  0.635
A0A0N7LBH5
Mitochondrial ribosomal protein MRP17.
    
  0.634
A0A0P1BGI8
Mitochondrial/chloroplast ribosomal protein S9.
    
  0.634
A0A0N7L9X3
Mitochondrial/chloroplast ribosomal protein S16.
   
  0.632
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.