STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BLT1Serine/threonine specific protein phosphatase PP1, catalytic subunit. (385 aa)    
Predicted Functional Partners:
A0A0P1BH89
Metallo-hydrolase oxidoreductase.
 
 
 0.917
A0A0P1B9S6
FOG: Ankyrin repeat.
   
 0.898
A0A0P1BK16
Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2.
    
 0.893
A0A0P1BB45
Phosphoprotein phosphatase.
    
 0.876
A0A0P1BSC5
Protein phosphatase, regulatory subunit PPP1R3C/D.
    
 0.870
A0A0P1BB83
mRNA cleavage and polyadenylation factor II complex, subunit CFT1 (CPSF subunit).
    
 0.857
A0A0P1BH40
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.852
A0A0P1BQ06
Polyadenylation factor I complex, subunit PFS2.
    
 0.850
A0A0P1B9Z9
Translation initiation factor eif2 alpha subunit.
   
 0.823
A0A0N7L906
Uncharacterized conserved protein.
    
 
 0.802
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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