STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BMM0Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family. (917 aa)    
Predicted Functional Partners:
A0A0P1BCY8
SNARE protein Syntaxin 1 and related proteins; Belongs to the syntaxin family.
   
 0.998
A0A0P1BIE1
SNAP-25 (Synaptosome-associated protein) component of SNARE complex.
   
 0.981
A0A0P1BMI0
Synaptobrevin.
    
 0.968
A0A0P1B8I8
Exocyst complex subunit SEC6.
    
 0.859
A0A0N7LA94
Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
   
 0.832
A0A0P1BE06
Exocyst complex subunit Sec8.
    
 0.748
A0A0P1BAA6
Exocyst subunit-Sec10p.
    
 0.742
A0A0N7LAZ1
Exocyst protein Sec3.
   
 0.716
A0A0N7L9G4
Exocyst complex subunit.
    
 0.710
A0A0P1BBK7
Annexin.
    
 0.686
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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