STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BN67Probable nik-1 protein (Os-1p protein). (1463 aa)    
Predicted Functional Partners:
A0A0P1BL50
Histidine phosphotransferase hpt1p.
    
 0.773
A0A0P1BE15
Related to ssk2-map kinase kinase kinase of the high osmolarity signal transduction pathway.
   
 0.690
A0A0P1BFI4
2-oxoisovalerate dehydrogenase subunit mitochondrial.
    
 0.620
A0A0P1BHJ1
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.620
A0A0P1BFH9
Glutathione-disulfide reductase.
    
 0.593
A0A0P1BC06
Dihydrolipoyl dehydrogenase.
    
 0.583
A0A0P1BBM1
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.579
A0A0P1BIS9
Phosphoribosyl pyrophosphokinase.
    
 0.579
A0A0P1BJX3
Ribose-phosphate pyrophosphokinase.
    
 0.579
A0A0P1BCP1
Dihydrolipoamide succinyltransferase.
    
 0.576
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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