STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BNB3Sphingolipid hydroxylase; Belongs to the sterol desaturase family. (404 aa)    
Predicted Functional Partners:
A0A0P1BR74
Sphingosine kinase, involved in sphingolipid metabolism.
   
 0.958
A0A0P1BJ80
Protein transporter of the TRAM (Translocating chain-associating membrane) superfamily.
   
 0.945
A0A0P1BMB7
Protein transporter of the TRAM (Translocating chain-associating membrane) superfamily.
   
 0.943
A0A0P1BEI2
Alkaline ceramidase.
     
 0.933
A0A0P1BH38
Sphingoid base-phosphate phosphatase.
    
 0.932
A0A0N7L9H2
Fatty acid desaturase.
   
 
 0.922
A0A0P1BLJ4
Sphingolipid fatty acid hydroxylase; Belongs to the sterol desaturase family.
   
 
 0.903
A0A0P1BQI2
Predicted 3-ketosphinganine reductase.
    
 0.885
A0A0N7LAL6
Neutral ceramidase.
     
 0.816
A0A0N7LAU9
C-8 sterol isomerase.
   
 0.794
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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