STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BNB5D-aspartate oxidase. (394 aa)    
Predicted Functional Partners:
A0A0N7LA52
Plp-dependent transferase.
  
 
 0.901
A0A0P1BLS4
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.875
A0A0N7LAL4
Alanine aminotransferase.
     
 0.828
A0A0N7LB41
5-aminolevulinate mitochondrial.
    
 0.824
A0A0P1BNU7
Glycine dehydrogenase.
   
 
 0.824
A0A0P1BRW5
Threonine aldolase.
    
 0.822
A0A0P1BKE1
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase.
  
 
 0.815
A0A0N7L9E2
Aspartate aminotransferase.
     
 0.804
A0A0P1BM01
Isocitrate lyase.
  
 
 0.795
A0A0P1BEG1
Dash subunit dad4.
  
 0.794
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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