STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BND1RNA-binding protein (RRM superfamily). (1027 aa)    
Predicted Functional Partners:
A0A0P1BA35
Duf663-domain-containing protein.
   
 
 0.993
A0A0N7L9I3
Brix-domain-containing protein.
   
   0.985
A0A0P1BQG0
WD40-repeat-containing subunit of the 18S rRNA processing complex.
   
 
 0.959
A0A0P1BAC2
Cell adhesion complex protein bystin.
   
 
 0.921
A0A0P1BB61
Apoptosis antagonizing transcription factor/protein transport protein.
   
 
 0.920
A0A0N7LAE9
Nucleolar protein fibrillarin NOP77 (RRM superfamily).
   
 
0.914
A0A0P1BM90
WD repeat protein.
   
 
 0.912
A0A0P1BRU2
WD40-repeat-containing subunit of the 18S rRNA processing complex.
   
   0.910
A0A0P1BG97
RNA helicase.
   
 
 0.909
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
   0.908
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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