STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BNG5P-loop containing nucleoside triphosphate hydrolase protein. (346 aa)    
Predicted Functional Partners:
A0A0N7L986
P-loop containing nucleoside triphosphate hydrolase protein.
   
0.999
A0A0P1B7F6
P-loop containing nucleoside triphosphate hydrolase protein.
  
0.999
A0A0P1BLM2
P-loop containing nucleoside triphosphate hydrolase protein.
  
0.999
A0A0P1BI93
Checkpoint RAD17-RFC complex, RAD17/RAD24 component.
    
 0.998
A0A0P1BSW1
Replication factor C subunit 1.
   
0.998
A0A0P1BG75
DNA polymerase iota/DNA damage inducible protein.
   
 0.982
A0A0P1BIQ1
DNA replication checkpoint protein CHL12/CTF18.
   
0.982
A0A0P1B7X8
Checkpoint 9-1-1 complex, RAD9 component.
   
 0.981
A0A0P1BLU5
Checkpoint protein; Belongs to the HUS1 family.
    
 0.980
A0A0P1BMT5
Replication factor C, subunit RFC1 (Large subunit).
   
 0.979
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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