STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BP59Manganese superoxide dismutase. (246 aa)    
Predicted Functional Partners:
A0A0P1BDN5
Related to mrp4-mitochondrial ribosomal small subunit; Belongs to the universal ribosomal protein uS2 family.
   
 
 0.962
A0A0P1BE91
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.956
A0A0N7LA14
Related to 30s ribosomal protein s18.
   
 
 0.943
A0A0P1B9U4
Related to mrps28-mitochondrial ribosomal small subunit.
  
 
 0.943
A0A0P1BBN7
RP-L23, MRPL23, rplW.
   
 
 0.938
A0A0P1BEK0
Aconitase homoaconitase.
   
 
 0.938
A0A0N7L9X3
Mitochondrial/chloroplast ribosomal protein S16.
   
 
 0.937
A0A0P1BNZ5
Ribosomal protein l15.
   
 
 0.937
A0A0P1BF71
Mitochondrial ribosomal protein S25.
   
 
 0.935
A0A0N7L8R3
Related to mrpl24-mitochondrial ribosomal large subunit.
   
   0.930
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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