STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BP78Diphthamide biosynthesis protein. (694 aa)    
Predicted Functional Partners:
A0A0P1BF68
Diphthamide biosynthesis protein.
   
0.990
A0A0P1BCK3
Zf-csl-domain-containing protein.
   
 0.973
A0A0P1BHJ6
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.916
A0A0P1BRE3
Diphthine synthase.
   
 0.912
A0A0P1BEU3
RNA helicase.
   
   0.792
A0A0P1B9I3
Translation elongation factor 2.
    
 0.779
MEF1
Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.
    
 0.779
A0A0P1BHV9
Related to mef2-translation elongation mitochondrial.
    
 0.779
A0A0P1BIC1
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.779
A0A0P1BKS2
U3 snoRNP-associated protein (Contains WD40 repeats).
   
    0.759
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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