STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BP91Peroxisomal dehydratase. (335 aa)    
Predicted Functional Partners:
A0A0P1BJK8
Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.970
A0A0P1BQK8
annotation not available
   
 0.970
A0A0P1BI26
Short-chain dehydrogenase reductase sdr; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
  0.940
A0A0P1BHF4
Acyltransferase ctase cot cpt.
   
 0.903
A0A0P1BNT4
Predicted gamma-butyrobetaine,2-oxoglutarate dioxygenase.
 
 
    0.896
A0A0P1BFV2
Long-chain acyl-CoA synthetases (AMP-forming).
  
 
 0.770
A0A0P1BJS9
TPR repeat-containing protein.
   
 0.764
A0A0P1BNB0
TPR repeat-containing protein.
   
 0.764
A0A0P1B8R1
Probable pot1-acetyl-c-peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.759
A0A0P1BHT2
Heparinase II/III-like.
  
 0.759
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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