STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
A0A0P1BPJ5Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (286 aa)    
Predicted Functional Partners:
A0A0P1BG75
DNA polymerase iota/DNA damage inducible protein.
   
 0.999
A0A0P1BLM2
P-loop containing nucleoside triphosphate hydrolase protein.
  
 0.991
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]
   
 0.983
A0A0N7L986
P-loop containing nucleoside triphosphate hydrolase protein.
  
 0.978
A0A0P1BGU2
Dna mismatch repair protein msh6.
   
 0.976
A0A0P1BNG5
P-loop containing nucleoside triphosphate hydrolase protein.
  
 0.976
A0A0P1BB87
DNA polymerase delta, regulatory subunit 55.
   
 0.969
A0A0P1BM74
DNA polymerase.
  
 0.968
A0A0P1B7F6
P-loop containing nucleoside triphosphate hydrolase protein.
  
 0.965
A0A0P1BKY7
Ubiquitin-like proteins.
   
 0.963
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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