STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BPM7Atp-dependent rna helicase fal1. (402 aa)    
Predicted Functional Partners:
A0A0P1B8N6
Rna-binding domain-containing protein.
   
 0.999
A0A0P1BCC7
Spliceosome-related protein.
    
 0.998
A0A0P1BID4
Mago nashi domain protein.
   
 0.998
A0A0P1BNZ3
FOG: RRM domain.
   
 0.993
A0A0P1BPB8
Rna annealing factor.
   
 0.992
A0A0P1B8U3
Nonsense-mediated decay protein Upf3.
   
 0.982
A0A0P1BJ92
Protein involved in high osmolarity signaling pathway.
   
 
 0.978
A0A0P1BD09
DEAH-box RNA helicase.
   
 0.975
A0A0P1BLN5
Atp-dependent rna helicase sub2.
  
0.975
A0A0P1B8G5
Protein involved in rRNA processing.
   
 0.973
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.