STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BPT8Poly [ADP-ribose] polymerase. (684 aa)    
Predicted Functional Partners:
A0A0P1BSX8
DNA-binding subunit of a DNA-dependent protein kinase (Ku80 autoantigen).
   
 
 0.885
A0A0P1BLH0
DNA-binding subunit of a DNA-dependent protein kinase (Ku70 autoantigen).
   
 
 0.841
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]
   
 0.840
A0A0P1B9S5
Nucleotide excision repair complex XPC-HR23B, subunit XPC/DPB11.
    
 0.829
A0A0P1BBY5
DNA polymerase IV (Family X).
    
 0.800
A0A0P1BLK0
DNA recombinational repair protein BRCA2.
    
 0.793
A0A0N7L936
Predicted hydrolase (HIT family).
   
 
 0.789
A0A0P1BBS2
Ca2-binding ef-hand protein.
    
 0.778
A0A0P1BKY7
Ubiquitin-like proteins.
    
 0.772
A0A0P1BFY1
Related to exo1-exonuclease which interacts with msh2p.
   
 0.763
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.