STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BR60Helicases. (2314 aa)    
Predicted Functional Partners:
A0A0P1B9B0
Translation initiation factor 2C (EIF-2C) and related proteins.
    
 
 0.674
A0A0P1BNY1
RNA-dependent RNA polymerase.
    
 
 0.659
A0A0P1A4K7
LP06848P-RELATED.
    
 
 0.516
A0A0P1BDW2
DNA polymerase sigma.
    
 
 0.516
A0A0P1B891
RNA-dependent RNA polymerase.
    
 
 0.443
A0A0P1BQA2
Dicer-like protein 1; Belongs to the helicase family. Dicer subfamily.
    
 
 0.426
A0A0P1BNR7
Uncharacterized conserved protein.
      
 0.418
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.