STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BRC9DNA-binding protein YL1 and related proteins. (610 aa)    
Predicted Functional Partners:
A0A0P1BKE3
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.976
A0A0P1BAX8
Transcription initiation factor IIF, auxiliary subunit.
    
 0.974
A0A0P1BKF9
Related to swc4-component of the swr1p complex.
    
 0.974
A0A0N7LAB3
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.973
A0A0P1BMF8
Histone H2A; Belongs to the histone H2A family.
    
 
 0.966
A0A0N7L9G1
Chromo domain-containing protein required for cell polarity.
    
 0.959
A0A0P1BPD5
Related to act1-actin; Belongs to the actin family.
    
 0.957
A0A0P1BJI0
Actin-related protein-Arp6p; Belongs to the actin family.
  
 
 
 0.952
A0A0P1BPN5
Predicted BBOX Zn-finger protein.
    
 
 0.949
A0A0P1BLT4
Histone acetyltransferase SAGA, TRRAP/TRA1 component, PI-3 kinase superfamily; Belongs to the PI3/PI4-kinase family.
    
 0.902
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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