STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BRH6Nop10p-domain-containing protein. (64 aa)    
Predicted Functional Partners:
A0A0P1BF47
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 0.999
A0A0P1BMU5
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.999
A0A0P1BAC7
Pseudouridine synthase.
   
 0.998
A0A0P1BFX0
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.989
A0A0N7LBA6
Uncharacterized conserved protein.
   
 
 0.949
A0A0P1BQN9
Uncharacterized protein.
   
 
 0.944
A0A0P1BF39
Guanine nucleotide-binding protein.
    
 0.943
A0A0P1BAZ2
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.939
A0A0P1BDE0
L30e-like protein.
   
 0.939
A0A0P1B9Z9
Translation initiation factor eif2 alpha subunit.
  
  
 0.933
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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