STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BRM3Cyclin. (274 aa)    
Predicted Functional Partners:
A0A0N7L9I0
Cyclin-dependent protein kinase inhibitor.
    
 0.992
A0A0P1BEZ1
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.925
A0A0P1BBH7
Cdc2 cyclin-dependent kinase; Belongs to the protein kinase superfamily.
    
 0.798
A0A0P1BSX8
DNA-binding subunit of a DNA-dependent protein kinase (Ku80 autoantigen).
    
 0.770
A0A0P1BLH0
DNA-binding subunit of a DNA-dependent protein kinase (Ku70 autoantigen).
    
 0.698
A0A0P1BAQ6
SWIM-type domain-containing protein.
    
 0.694
A0A0P1BPS6
E, lig.
    
 0.694
A0A0N7LAB1
Exosome 3'-5' exoribonuclease complex, subunit PM/SCL-100 (Rrp6).
    
 0.629
A0A0P1BS67
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.629
A0A0P1BPU8
ATP-dependent DNA ligase I.
    
 0.628
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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