STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BS86Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (922 aa)    
Predicted Functional Partners:
A0A0P1BQ55
Related to apg1-essential for autophagocytosis.
   
 0.997
A0A0P1BKV4
Wd40 repeat-like protein.
   
 0.976
A0A0P1BMA0
CGTHBA PROTEIN (-14 GENE PROTEIN).
   
 0.974
A0A0P1BGT9
Cytoplasm to vacuole targeting protein.
   
 0.962
A0A0P1BR22
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
    
 0.946
A0A0P1BIR6
Predicted membrane protein.
    
   0.933
A0A0P1B8B7
Beclin-like protein.
    
 0.898
A0A0P1BKG6
Phosphatidylinositol 3-kinase VPS34.
    
 0.864
A0A0P1B8V0
Protein kinase containing WD40 repeats.
     
 0.854
A0A0P1BJ38
Mannose-6-phosphate receptor binding domain.
     
 0.825
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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