STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BSY6Uncharacterized protein. (386 aa)    
Predicted Functional Partners:
A0A0N7L965
Related to pre-mrna splicing factor.
    
 0.793
A0A0P1BA76
Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily).
    
 0.793
A0A0P1BI84
Cdc5 protein.
    
   0.775
A0A0P1BCB4
Rrna primary transcript binding protein.
    
 
 0.752
A0A0N7LAY9
Related to snp1-u1 small nuclear ribonucleoprotein.
    
 0.637
A0A0N7L9N2
Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily).
    
 0.589
A0A0N7LB09
mRNA cleavage and polyadenylation factor I complex, subunit RNA15.
    
 0.589
A0A0P1BHB1
mRNA cleavage and polyadenylation factor I complex, subunit RNA15.
    
 0.589
A0A0P1BQI8
Splicing factor cc1-like protein.
    
 
 0.589
A0A0P1BCJ2
Protein kinase.
    
 
 0.559
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.