STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APU49960.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (187 aa)    
Predicted Functional Partners:
APU47583.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.731
APU47370.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.668
lptE
Hypothetical protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family.
  
     0.643
APU48104.1
EcsC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.629
APU49278.1
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.606
APU50023.1
Peptidase M48; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.596
APU47582.1
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.590
fokIM
DNA modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.589
APU48476.1
DUF2358 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.583
APU48474.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.552
Your Current Organism:
Acinetobacter junii
NCBI taxonomy Id: 40215
Other names: A. junii, ATCC 17908, Acinetobacter genomosp. 5, Acinetobacter genomospecies 5, Acinetobacter grimontii, Acinetobacter grimontii Carr et al. 2003, Acinetobacter sp. WR4, Acinetobacter sp. WR5, CCUG 50767 [[Acinetobacter grimontii]], CCUG 889, CIP 107470, CIP 64.5, DSM 14968 [[Acinetobacter grimontii]], DSM 6964, LMG 998, LMG:998, NCTC 12153, strain 17A04 [[Acinetobacter grimontii]], strain Mannheim 2723/59
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.