STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APU48327.1Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)    
Predicted Functional Partners:
APU48328.1
Peptidase M15; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.729
APU48998.1
U32 family peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.661
fdxA
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.647
APU49086.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.596
APU47784.1
tRNA threonylcarbamoyladenosine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.559
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
       0.483
Your Current Organism:
Acinetobacter junii
NCBI taxonomy Id: 40215
Other names: A. junii, ATCC 17908, Acinetobacter genomosp. 5, Acinetobacter genomospecies 5, Acinetobacter grimontii, Acinetobacter grimontii Carr et al. 2003, Acinetobacter sp. WR4, Acinetobacter sp. WR5, CCUG 50767 [[Acinetobacter grimontii]], CCUG 889, CIP 107470, CIP 64.5, DSM 14968 [[Acinetobacter grimontii]], DSM 6964, LMG 998, LMG:998, NCTC 12153, strain 17A04 [[Acinetobacter grimontii]], strain Mannheim 2723/59
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.