STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpmHUnannotated protein; Belongs to the bacterial ribosomal protein bL34 family. (44 aa)    
Predicted Functional Partners:
rpsT
Unannotated protein; Binds directly to 16S ribosomal RNA.
  
 
 0.994
rpmB
Unannotated protein; Belongs to the bacterial ribosomal protein bL28 family.
  
 
 0.994
rplU
Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
  
 
 0.994
rpsP
Unannotated protein; Belongs to the bacterial ribosomal protein bS16 family.
   
 
 0.992
rpmF
Unannotated protein; Belongs to the bacterial ribosomal protein bL32 family.
   
 
 0.992
rplM
Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
 
 0.991
rpsU
Unannotated protein; Belongs to the bacterial ribosomal protein bS21 family.
   
 
 0.989
rpmI
Unannotated protein; Belongs to the bacterial ribosomal protein bL35 family.
  
 
 0.988
rpsO
Unannotated protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
   
 
 0.988
rplS
Unannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
   
 
 0.987
Your Current Organism:
Acinetobacter radioresistens
NCBI taxonomy Id: 40216
Other names: A. radioresistens, ATCC 43998, Acinetobacter genomosp. 12, Acinetobacter genomospecies 12, CIP 103788, DSM 6976, IAM 13186, JCM 9326, LMG 10613, LMG:10613, NBRC 102413, strain FO-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.