STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSJHYP00000003055annotation not available (238 aa)    
Predicted Functional Partners:
NME8
NME/NM23 family member 8.
    
 0.626
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.580
BARD1
BRCA1 associated RING domain 1.
    
 0.570
ENSJHYP00000023260
annotation not available
    
  0.551
ENSJHYP00000023275
annotation not available
    
  0.551
SUFU
SUFU negative regulator of hedgehog signaling.
   
 0.549
MRPS10
Mitochondrial ribosomal protein S10.
   
  0.548
ENSJHYP00000017299
annotation not available
    
 0.544
SPOPL
Speckle type BTB/POZ protein like.
   
  0.540
SPOP
Speckle type BTB/POZ protein.
   
  0.540
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.