STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSJHYP00000003707annotation not available (81 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.603
FLII
FLII actin remodeling protein.
    
 0.560
C1QC
Complement C1q C chain.
    
  0.550
TUBB1
Tubulin beta 1 class VI.
    
 0.534
MC1R
Melanocortin 1 receptor.
    
 0.531
ENSJHYP00000009208
annotation not available
    
 0.525
SETDB1
SET domain bifurcated histone lysine methyltransferase 1.
    
  0.515
SETDB2
SET domain bifurcated histone lysine methyltransferase 2.
    
  0.515
WDR18
WD repeat domain 18.
    
  0.502
TAF12
TATA-box binding protein associated factor 12.
    
 0.488
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.