STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSJHYP00000003974annotation not available (206 aa)    
Predicted Functional Partners:
ENSJHYP00000021447
annotation not available
    
 0.975
MRE11
MRE11 homolog, double strand break repair nuclease.
  
 
 0.937
FDX1
Ferredoxin 1.
   
 
 0.907
ENSJHYP00000019960
annotation not available
   
 
 0.907
ENSJHYP00000009662
annotation not available
    
  0.891
ENSJHYP00000011952
annotation not available
   
   0.891
RAB19
RAB19, member RAS oncogene family.
   
 0.877
RAB1A
RAB1A, member RAS oncogene family.
   
 0.877
RAB43
RAB43, member RAS oncogene family.
   
 0.877
RAB33A
RAB33A, member RAS oncogene family.
   
 0.877
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.