STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPB41Erythrocyte membrane protein band 4.1. (850 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.987
MPP1
Membrane palmitoylated protein 1.
   
 0.797
CADM1
Cell adhesion molecule 1.
    
 
 0.791
SPTAN1
Spectrin alpha, non-erythrocytic 1.
   
 0.687
TFDP2
Transcription factor Dp-2.
   
    0.678
MED28
Mediator complex subunit 28.
   
    0.678
HSPA5
Heat shock protein family A (Hsp70) member 5.
    
  0.673
GPS1
G protein pathway suppressor 1.
    
  0.673
COPS5
COP9 signalosome subunit 5.
    
  0.673
COPS2
COP9 signalosome subunit 2.
    
  0.672
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.