STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABTB2Ankyrin repeat and BTB domain containing 2. (1016 aa)    
Predicted Functional Partners:
TTC8
Tetratricopeptide repeat domain 8.
    
 0.616
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.613
UBXN7
UBX domain protein 7.
    
  0.607
BBS7
Bardet-Biedl syndrome 7.
    
 0.587
KIFC3
Kinesin family member C3.
    
 0.578
ENSJHYP00000008168
annotation not available
    
 0.578
NBR1
NBR1 autophagy cargo receptor.
    
 0.575
ENSJHYP00000003671
annotation not available
    
 0.574
ENSJHYP00000003863
annotation not available
    
 0.574
CUL3
Cullin 3.
    
 0.568
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.