STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGI3Leucine rich repeat LGI family member 3. (534 aa)    
Predicted Functional Partners:
ADAM22
ADAM metallopeptidase domain 22.
   
 
 0.735
ADAM23
ADAM metallopeptidase domain 23.
   
 
 0.726
MTUS1
Microtubule associated scaffold protein 1.
    
 
 0.629
ADAM11
ADAM metallopeptidase domain 11.
   
 
 0.614
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.603
FGF18
Fibroblast growth factor 18.
    
 0.585
CHMP7
Charged multivesicular body protein 7.
      
 0.575
C1QC
Complement C1q C chain.
    
  0.550
MC1R
Melanocortin 1 receptor.
    
 0.531
TUBB1
Tubulin beta 1 class VI.
    
 0.531
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.