STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA5BCarbonic anhydrase 5B. (298 aa)    
Predicted Functional Partners:
RPF2
Ribosome production factor 2 homolog.
   
 
 0.651
RPL5
Ribosomal protein L5.
    
 
 0.640
RRS1
Ribosome biogenesis regulator 1 homolog.
   
 
 0.600
RPL11
Ribosomal protein L11.
    
 
 0.598
RBM34
RNA binding motif protein 34.
   
 
 0.443
CA8
Carbonic anhydrase 8.
  
 
 
0.436
ENSJHYP00000012644
annotation not available
   
   0.425
NSUN6
NOP2/Sun RNA methyltransferase 6.
   
   0.425
C17orf67
Chromosome 17 open reading frame 67.
      
 0.422
NLE1
Notchless homolog 1.
   
  
 0.417
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.