STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAX2Ventral anterior homeobox 2. (320 aa)    
Predicted Functional Partners:
BSX
Brain specific homeobox.
   
  0.624
ENSJHYP00000016014
annotation not available
   
  0.613
PHACTR4
Phosphatase and actin regulator 4.
      
 0.544
ENSJHYP00000023930
annotation not available
      
 0.532
SOX9
SRY-box transcription factor 9.
      
 0.472
ENSJHYP00000011730
annotation not available
   
 
 0.411
SIX3
SIX homeobox 3.
   
 
 0.411
SIX6
SIX homeobox 6.
   
 
 0.411
FOXA2
Forkhead box A2.
    
 0.408
FOXA1
Forkhead box A1.
    
 0.408
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.