STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSJHYP00000007222annotation not available (240 aa)    
Predicted Functional Partners:
SMPD2
Sphingomyelin phosphodiesterase 2.
     
 0.730
SMPD4
Sphingomyelin phosphodiesterase 4.
     
 0.729
ENSJHYP00000019347
annotation not available
     
 0.729
DEGS2
Delta 4-desaturase, sphingolipid 2.
     
 0.705
SMPD3
Sphingomyelin phosphodiesterase 3.
     
 0.699
ENSJHYP00000001569
annotation not available
    
 0.697
ENSJHYP00000011571
annotation not available
     
 0.697
ENSJHYP00000011578
annotation not available
     
 0.697
CERS6
Ceramide synthase 6.
    
 0.695
CERS5
Ceramide synthase 5.
    
 0.695
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.